Report for 1588.m00144

 > 1588.m00144, length: 444, copies: 1 

MELPAAKRQFSTTSQGKEVSGISSCKPTYQRYQSCPPEVYRRQASSYSVPSSEISRSSVRSSGSFRAAAQSLAGV

FSCFVPRKSRNEDELEISRTTISQGSRSTGYQVSIDPAGTGYPQESTELTVAEIFKATSNFSDKNIIKQGSYSSI

YRGKLRDGSEIAIKCARKLNSQYASAELRRELEILQKIDHKNLVRFLGFFEREDESLTVVEYVSNGSLREHLDES

CGNGLELAQRLNIAIDVAHAITYLHEFKEQRIIHRNVRSSNVLLTDTLTAKLAGVGLARMAGGESSESEDTQGKS

AAGYVDPEYLSTYELTDKSDVYSFGVLLVELVTGRPPIERRRDLDPRPTTKWALQRFRGGEVVVAMDPRIRRSPA

SVATVEKVMELAEQCVAPARKERPSMRRCTEALWSVRREYHRRQDAPAAAAAVAAAPTQDRSSDWVKVV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	136	410	3e-35
Ser/Thr pkinase [Pfam ls]	136	410	8.5e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	14	411	4e-20
Pto [L. esculentum]	100	411	4e-40
Rpg1 [Hordeum vulgare]	118	408	2e-19
FLS2 [A.thaliana]	128	412	1e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1588.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)