Report for 1935.m00187

 > 1935.m00187, length: 392, copies: 1 

MGSAASSCCGGSKKVEQGCVSASMSSNTWRIFSYKELHAATNGFSEENKLGEGGFGSVYWGKTSDGLQIAVKKLK

ATNTSKAEMEFAVEVEVLARVRHKNLLGLRGYCAGGAAGDQRMIVYDYMPNLSLLSHLHGQFAADVRLDWARRMA

VAVGAAEGLVHLHHEATPHIIHRDIKASNVLLDSGFAPLVADFGVKGTLGYLAPEYAMWGKVSGACDVYSFGILL

LELVSGRKPIERLPSGAKRTVTEWAEPLIARGRLADLVDPRLRGAFDAAQLARAVEAAALCVQAEPERRPDMRAV

VRILRGDADAKPVRMKSIKYADHLMEMDKSSVYYGEDGGGDGEEDMDDEEVEEYSLMEDKSSVNFGVFGAMPVQT

MHDPYVRRFGGGDGIKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	44	194	6.8e-25
Ser/Thr pkinase [Pfam ls]	44	301	1e-23
Ser/Thr pkinase [Pfam fs]	197	239	2.6e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	7	310	8e-30
Pto [L. esculentum]	11	301	3e-44
Xa21 [O. sativa]	20	134	1e-12
Rpg1 [Hordeum vulgare]	30	233	1e-26
Rpg1 [Hordeum vulgare]	32	302	9e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1935.m00187

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)