Report for 1952.m00136

 > 1952.m00136, length: 313, copies: 1 

NLIGKGGHAEVYKGHLADGQFVAVKRLTKGGNKEDRISDFLSELGIIAHVNHPNAAQLLGFSVEGGLHLVLQFSP

HGSLASVLHGTKGALKWKARFNIALGIAEGLLYLHEGCHRRIIHRDIKASNILLTEDYQPQISDFGLAKWLPDKW

THHVVFPIEGTFGYMSPEYFMHGIINEKTDVFAYGVLLLELVTGRKAVDSSRQSLVIWAKPLLDSNNMKELVDPS

LDVGYDPEEMAHILAVASMCIHHSSSSRPSMKSVVRFLKGDRESLEMMQMQRPKLMKPLMFDSGDSEDYTRSSYL

NDLDRHKKLALEQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	1	263	2.4e-39
Ser/Thr pkinase [Pfam fs]	3	223	5e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	1	263	7e-26
Rpg1 [Hordeum vulgare]	1	196	1e-22
Rpg1 [Hordeum vulgare]	2	261	2e-20
Pto [L. esculentum]	3	260	6e-41

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1952.m00136

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)