Report for 1971.m00165

 > 1971.m00165, length: 451, copies: 2 

MGAWGMGYNPLFCITMKANDVPPVPEDTLLLLIDPVWVGNGHDVDAYTKMTRKRSRTGQQQSDPYNEVFSGAENI

TRYSYKELAKATLNFDQSNKIGEGGFGPVYKGTLKDGTDVAVKLLSLQSRQGVKEFLNELMAISDISHENLVKLH

GCCVEGRHRILVYNYLENNSLAHTLLGSRQSNIQFNWRARVNICIGVAKGLAFLHDGVRPHIVHRDIKASNILLD

KDLTPKISDFGLAKLLPSDASHVSTRVAGTLGYLAPEYAIRGQVTRKSDVYSFGVLLVEIVSGRCNTDTKLPYED

QILLEKYHKCHDSHVLFRDKSCYNFGFCHPTTWKCYDQGCLEKAIDSSMVDDVDVDEACRFLKVGLLCTQDISKR

RPTMSMVISMLTGEMEVDKEKISKPDVIRDFRDLKLRSKATSSSSLLTSIMARSTPSSSQETTRTSITVTAISDR

D

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	90	309	3.6e-51
Ser/Thr pkinase [Pfam ls]	90	388	1.7e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	52	386	7e-37
Pto [L. esculentum]	58	397	2e-53
Rpg1 [Hordeum vulgare]	78	419	5e-31
Rpg1 [Hordeum vulgare]	83	386	3e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1971.m00165

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)