Report for 1978.m00156

 > 1978.m00156, length: 392, copies: 1 

MRPLYLRSSGSFKKLLLSISHRGAKNGNGDAAAKERYTPAAAAAAPESPRKPAWRCFSYEEIHRATNAFHEGNLV

GKGGSSEVYRGELPDGRAVAVKRLMGAWACERRERDFLAELGTVGHARHPNVCALLGCCVDRDLYLVFHFSGRGS

VSANLHDEKKAPAMGWAVRRAIAVGTARGLEYLHKGCQRRIIHRDIKASNVLLTDDFQPQISDFGLAKWLPSEWT

HRAIAPIEGTFGCLAPEYYTHGIVDEKTDVFAFGVFLLEIMTGRKPVDGSHKSLLSWARPFLNEGRIESLVDPRI

GGDYDGEEARRLAFVASLCIRSSAKWRPSMTEVLELLEGVEIRQERWTMPEAVEDDDDEELWRFDDLDDEDDEDE

EEFNTASPSSCSSSLSN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	69	274	2.6e-34
Ser/Thr pkinase [Pfam ls]	69	339	5.4e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	30	342	9e-20
Pto [L. esculentum]	36	338	1e-43
Rpg1 [Hordeum vulgare]	55	342	2e-25
FLS2 [A.thaliana]	57	334	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1978.m00156

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)