Report for 2086.m00246

 > 2086.m00246, length: 395, copies: 1 

LPRFGPKPRSKVLDIVLPLATAFLVAAVLAAVFFVVRRRRRFAEVREDWEDEFGPHRFAYKDLFRATDGFKDRNL

LGVGGFGRVYRGVLPESNLEIAVKRVSHDSRQGIREFVAEVVSIGRLRHRNLVQLLGYCRRKNELLLVYDYMANG

SLDKYLHERNVTTLFWPERLWIIKGVASGLLYLHEDWEQVVIHRDIKASNVLLDSAMNGRLGDFGLARLYDHGTD

PKTTHVVGTMGYLAPELVRTGKASPLTDVFAFGVFLLEVTCGRRPIETDEHNKRVVLVDLVLEHHRNGSIVGAAD

PRLTGKFDVEEVALVLKLGLLCSHPLPGARPSMRNVMQYLERGACLLCSRIWQLVLGLSTPVAWNQVIHLCNNQT

FSNHQDVMKWKFDNKNLNVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	70	270	1.2e-49
Ser/Thr pkinase [Pfam ls]	70	340	3.5e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	1	157	5e-15
FLS2 [A.thaliana]	9	340	2e-35
Pto [L. esculentum]	48	341	6e-52
Rpg1 [Hordeum vulgare]	51	363	7e-31
Rpg1 [Hordeum vulgare]	56	354	6e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	15	37	out -> in

Report for 2086.m00246

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)