Report for 2230.m00125

 > 2230.m00125, length: 431, copies: 2 

MAIANGSLALALIGVITTGIVAVVTIVAIYKCAKIAIKMWYSSSRDHHTPIANGGGSSSSRGGIGGADADVVEMG

SMSHFIEGLQNERPVRFSARQLRAFTKSYAHKVGSGGFGVVYRGVFPSGAPVAVKVLNSTLGKRAEEQFMAEVGT

IGRTYHINLVRLYGFCFDADVKALVYEYMEKGSLDRYLFDSSPSPAAERIGFEKLHEIAVGTAKAVRYLHEECAQ

RIIHYDIKPENVLLGAGMAPKVSDFGLAKLCDREDTHLTITGARGTPGYAAPELWMPLPVTHKCDVYSYGMLLFE

MLGRRRNLELGAGAGAHGHGSQEWYPRWVWHRFEAGETEAVLARATAAAAGGGREREKAERVCMVALWCVQYRPE

DRPSMGNVVRMLEGEDHIAAPRNPFAHLAPYSAAGSSPTTTTATTESDGSSARTGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	102	389	2.6e-36
Ser/Thr pkinase [Pfam fs]	107	302	2.3e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	70	387	3e-27
FLS2 [A.thaliana]	91	387	2e-30
Pto [L. esculentum]	91	388	3e-33
Rpg1 [Hordeum vulgare]	103	307	1e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 2230.m00125

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)