Report for 2230.m00126

 > 2230.m00126, length: 419, copies: 2 

MKYTSLALAGIIIGGIAAILVLKFIMRCVEAKHAERARRREEEAVPVSPPASGTYSSVDVRVEMGSVDRFLDDIL

REKPARFTPENLREFTGDYAERLGAGGFGVVYRGRFPGGVQVAVKILHRTLDRRAEEQFMAEVATAGRTYHINLV

RLYGFCFDATTKALVYEYLENGSLDRVLFDAAAAAALEFDTLHGIVVGTARGVRYLHEECQHRIIHYDIKPGNVL

LAGDYAPKVADFGLAKLCSRDNTHLTMTGARGTPGYAAPELWLPLPVTHKCDVYSFGMLVFEILGRRRNLDTQRP

AESQEWYPRWAWQRFDQGRFGEVMAASGIRSKDGEKAERMCKVALWCIQYQPEARPSMSSVVRMLEGEEQIARPV

NPFAYMATMDAISSSSSGGGGVSTATSASASGDSAQSTRHDICH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	92	289	9.4e-40
Ser/Thr pkinase [Pfam ls]	92	367	4.8e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	11	365	8e-33
Rpg1 [Hordeum vulgare]	78	365	3e-30
Pto [L. esculentum]	81	366	4e-36
Rpg1 [Hordeum vulgare]	82	366	5e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	22	in -> out

Report for 2230.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)