Report for 2240.m00168

 > 2240.m00168, length: 441, copies: 1 

MSLAGTGRFCGVLVAPSSLVPFSLLVFIAAAAAVARAAAELNLPICNTAIIPLLHVEVYKTATTTEDMSWWCCIP

KSKKGENPYSHGVSGIPPEKNIRLFSYSELRSATENFNRSNKIGRGGFGTVYKGTIRNGRDVAVKVLSAESRQGV

REFLTEIDVITNVKHPNLVELIGCCVEGNNRILVYEYLENSSLDRALLGSNSEPANFTWSIRSAICIGIAKGLAY

LHEEIASPIVHRDIKASNILLDKLYNPKIGDFGLAKLFPDNITHISTRVAGTTGYLAPEYAWHGQLTKRADIYSF

GVLVLEIVSGKSSSRSLLADDKILLEKAWELHEVGKLKELVDSEMGDYPEEEVLRYIKTALFCTQAAAARRPSMP

QVVTMLSKPIRINERELTAPGYIHDYNGTVSKATNSSNSRFKHSASDTSDMFSTVVPPTVSEISPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	112	310	1.8e-53
Ser/Thr pkinase [Pfam ls]	112	381	2.2e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	26	194	2e-12
FLS2 [A.thaliana]	72	383	1e-43
Rpg1 [Hordeum vulgare]	92	383	7e-34
Rpg1 [Hordeum vulgare]	98	382	1e-35
Pto [L. esculentum]	100	389	3e-57

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	12	34	in -> out

Report for 2240.m00168

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)