Report for 2501.m00113

 > 2501.m00113, length: 411, copies: 2 

MAGQQQGDSWDRIKAIIVVLDFDPSGDMNITKFTYKELSRVTENFSPSNKIGEGGFGSVYKGKLRNGKLVAVKVL

SLESRQGAKEFLNELMAISNVSHENLVKLYGYCVEGNQRILVYNYLENNSLAQTLLGYGHSNIQFNWATRVNICV

GIARGLTYLHEVVNPHIVHRDIKASNILLDKDLTPKISDFGLAKLLPPDASHVSTRVAGTFFTYSVLHDRGYLAP

EYAIRGQVTRKSDVYSFGVLLLEIVSGRSNTNTRLPYEDQILLERFPEITNGVLLLQTWVHYEEGDLEKIIDASL

GDDLDVAQACEMDVELAKISKPAIISDFMDLKVRSMRKEVDIVSSSTSTLLSSIMAHSSPLLSQETTEASMTFTA

ISDPSEVVHECMQMQACNNGWSIRDQHMSELEVITN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	45	252	1.9e-49
Ser/Thr pkinase [Pfam ls]	45	315	2e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	17	255	1e-29
FLS2 [A.thaliana]	23	304	2e-35
Pto [L. esculentum]	23	304	7e-52
Rpg1 [Hordeum vulgare]	32	324	6e-29
Xa21 [O. sativa]	34	130	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2501.m00113

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)