Report for 2505.m00118

 > 2505.m00118, length: 531, copies: 1 

LQKLYLSHNNLEGVIPPELSYLKQLINLSLSENKLTGEIPGTLSQCKDLANIQMGNNFLTGNIPVTFGDLKSLGV

LNLSHNSLSGTIPTTLNDLPVMSKLDLSYNRLQGKIPMTGIFANPTVVSVQGNIGLCGGVMDLRMPPCQVVSQRR

KTQYYLIRVLIPIFGFMSLILVVYFLLLEKMKPREKYISSQSFGENFLKVSYNDLAQATRNFSEANLIGKGSYGT

VYRGKLKECKLEVAVKVFDLEMRGAERSFISECEALRSIQHRNLLPIITACSTVDSTGNVFKALVYEYMPNGNLD

TWIHDKEGGKAPGRLGLRQTISICVNIADALDYLHHECGRTTIHCDLKPSNILLADDMNALLGDFGIARFYIDSW

STSTGSNSTVGVKGTIGYIPPEYAGGGHPSTSGDVYSFGIVILELITGKRPTDPMFKDGLDIISFVESNFPHQIF

QVIDARLAEKSMDSNQTNMTLENAVHQCLISLLQLALSCTRKLPSDRMNMKQIANKMHSIKTTYVGLEAKKYGPA

CNEQDA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	1	23	6
LRR [Pfam ls]	24	47	0.6
LRR [Pfam ls]	72	95	0.078
Ser/Thr pkinase [Pfam fs]	212	428	7.2e-42
Ser/Thr pkinase [Pfam ls]	212	503	8.9e-39

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	1	23	0.29
LRR [sensitive, ls]	1	23	6
LRR [sensitive, ls]	24	47	0.029
LRR [sensitive, ls]	24	47	0.6
LRR [sensitive, ls]	48	71	0.73
LRR [sensitive, ls]	48	71	15
LRR [sensitive, ls]	72	95	0.0038
LRR [sensitive, ls]	72	95	0.078
LRR [sensitive, ls]	96	120	2.2
LRR [sensitive, ls]	96	120	45

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	1	128	1e-11
CLV2 [A. thaliana]	1	135	1e-14
CLV2 [A. thaliana]	1	111	5e-14
CLV2 [A. thaliana]	1	112	5e-13
CLV2 [A. thaliana]	1	112	2e-12
FLS2 [A.thaliana]	1	129	1e-12
FLS2 [A.thaliana]	1	128	2e-12
FLS2 [A.thaliana]	1	112	3e-12
FLS2 [A.thaliana]	1	511	3e-69
FLS2 [A.thaliana]	1	128	2e-14
FLS2 [A.thaliana]	1	128	1e-13
FLS2 [A.thaliana]	1	112	2e-13
FLS2 [A.thaliana]	1	112	2e-13
FLS2 [A.thaliana]	1	111	4e-13
FLS2 [A.thaliana]	1	265	4e-12
FLS2 [A.thaliana]	1	112	5e-12
FLS2 [A.thaliana]	1	112	7e-11
Xa21 [O. sativa]	1	112	4e-17
Xa21 [O. sativa]	1	125	1e-15
Xa21 [O. sativa]	1	119	2e-15
Xa21 [O. sativa]	1	112	6e-14
Xa21 [O. sativa]	1	114	3e-11
Xa21 [O. sativa]	3	112	7e-17
CLV2 [A. thaliana]	4	114	3e-14
FLS2 [A.thaliana]	4	112	2e-11
Xa21 [O. sativa]	4	322	1e-69
Cf-9 [L. pimpinellifolium]	5	133	7e-12
FLS2 [A.thaliana]	6	112	9e-11
FLS2 [A.thaliana]	8	112	3e-11
Pto [L. esculentum]	188	460	5e-27
Rpg1 [Hordeum vulgare]	201	510	1e-24
Rpg1 [Hordeum vulgare]	205	424	6e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	156	178	in -> out

Report for 2505.m00118

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)