Report for 2505.m00120

 > 2505.m00120, length: 438, copies: 1 

MACHLRLFPFTQLLVLVLYKIAAVGADPANAELSTKITQHSPLYNPQPQDFPNEELYRNYLVIQRFKKTITSDPK

NITATWTGHDICGNTTYLGFYCAALPGRTKKPTVTVVIFNGYGLRAPKLEGFIDHLPDLALFHAASNDFGGDIPY

LTGLAYNYKINVDSNLQIQDDFSRDMVGSHVTTKVHGYCVNLDLDITFHLRPGKDDKKGRSIPGATDSKALLLNY

NHLSGPLPVNIGFSKLSYLALANNRLTGAIPPSILHLQDSLLEVLLLNNQLSGCLPHELGMLTKAAVFDAGMNQL

TGPIPSSFSCLTSVEQLNLGGNRLYGEIPDALCKLAAVPAGRLANLTLSSNYFTSVGPACLSLIKDGVLNVRNNC

IPGFANQRRPAECASFHSQPKACPAASATHVACPAGAANAAAAPADRVVKDYSSYVTYATLHE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	240	263	1.7
LRR [Pfam ls]	313	336	1.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	240	263	0.082
LRR [sensitive, ls]	240	263	1.7
LRR [sensitive, ls]	313	336	0.059
LRR [sensitive, ls]	313	336	1.2
LRR [sensitive, ls]	342	365	0.74
LRR [sensitive, ls]	342	365	15

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	100	358	3e-15
FLS2 [A.thaliana]	126	365	2e-11
CLV2 [A. thaliana]	132	361	2e-12
FLS2 [A.thaliana]	194	365	2e-11
FLS2 [A.thaliana]	219	378	2e-12
Xa21 [O. sativa]	219	356	8e-13
Xa21 [O. sativa]	220	338	1e-13
Xa21 [O. sativa]	239	374	6e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2505.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)