Report for 2760.m00157

 > 2760.m00157, length: 689, copies: 2 

MAASRLVAAAAIVVVVLVLAGAGAAGAAGAGEVRALLDLAAGLDPTGRLLPSWAPGRDPCGREGGGGFEGVACDG

ATGAVANVSLQGKGLAGTLPPAVAGLTALTGLYLHYNRLTGALPRELAALSRLTDLYLNVNNFSGPIPPEIAAMP

SLQVVQLCYNQLTGGVPTQLGLLKRLTVLELQSNHLSGAIPASLGDLPQLVRLDLSFNNLFGSIPVRLALLPRLL

ALDVRNNTLTGSVPSELAKLQGGFQYANNTDLCGTGLPALRPCTPADLISPDMPQPFSAGISPQITPGSSSDGHG

HCTGTHCPPSTKALAAVVVVAVILLAVTGAGMFALSWYRWRKQRVVAGSPAAVGGRCSTDAAGKDSFRKSASSTL

VSLEYSNGWDPLADGRGGIGFSQEVAQSFRFNMEDVESATQYFSELNILGKNGNFAATYRGTLRDGTSVVVKRLG

KTCCKQEEAEFLKGLKLLAELQHENIVGLRGFCCSRARGECFLVYDFVPNGSLSQFLDIDADDVARSNGRVLEWS

TRISIIRGIAKGIEYLHSTRANKPPLVHQNISADKVLVDYTYRPLISGSGLHKLLVDDLVFSTLKASAAMGYLAP

EYTTTGRFSEKSDVYAFGVIVFQILTGKSKIMQLPLESSNDEDLIDGNLRGCYSAAEAAKLAKIASACTSENPDH

RPTMEELIQELCTF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	103	126	1.9
LRR [Pfam ls]	127	150	8.6
LRR [Pfam ls]	151	174	8.1
LRR [Pfam ls]	175	198	0.065
LRR [Pfam ls]	199	222	0.2
LRR [Pfam ls]	223	246	3
Ser/Thr pkinase [Pfam fs]	418	543	2.2e-14
Ser/Thr pkinase [Pfam ls]	418	688	3.1e-15
Ser/Thr pkinase [Pfam fs]	596	684	1.2e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	103	126	0.096
LRR [sensitive, ls]	103	126	1.9
LRR [sensitive, ls]	127	150	0.44
LRR [sensitive, ls]	127	150	8.6
LRR [sensitive, ls]	151	174	0.41
LRR [sensitive, ls]	151	174	8.1
LRR [sensitive, ls]	175	198	0.0033
LRR [sensitive, ls]	175	198	0.065
LRR [sensitive, ls]	199	222	0.01
LRR [sensitive, ls]	199	222	0.2
LRR [sensitive, ls]	223	246	0.15
LRR [sensitive, ls]	223	246	3

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	12	245	3e-26
Xa21 [O. sativa]	16	245	5e-16
Xa21 [O. sativa]	26	253	3e-29
CLV2 [A. thaliana]	70	238	5e-12
CLV2 [A. thaliana]	72	246	6e-20
FLS2 [A.thaliana]	75	245	2e-20
Cf-9 [L. pimpinellifolium]	76	238	7e-15
FLS2 [A.thaliana]	77	246	2e-19
FLS2 [A.thaliana]	82	246	7e-19
Cf-9 [L. pimpinellifolium]	83	238	1e-15
CLV2 [A. thaliana]	83	265	6e-17
CLV2 [A. thaliana]	83	244	1e-16
FLS2 [A.thaliana]	83	260	4e-25
FLS2 [A.thaliana]	83	245	6e-20
FLS2 [A.thaliana]	83	245	4e-17
Xa21 [O. sativa]	83	515	7e-25
Xa21 [O. sativa]	83	268	1e-23
Xa21 [O. sativa]	83	265	5e-21
FLS2 [A.thaliana]	87	273	2e-22
CLV2 [A. thaliana]	90	241	8e-17
FLS2 [A.thaliana]	90	269	2e-22
FLS2 [A.thaliana]	90	247	4e-20
CLV2 [A. thaliana]	92	245	7e-16
Cf-9 [L. pimpinellifolium]	103	255	1e-10
Pto [L. esculentum]	402	686	7e-36
Rpg1 [Hordeum vulgare]	404	686	3e-20
FLS2 [A.thaliana]	405	686	6e-23
Rpg1 [Hordeum vulgare]	406	686	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	89	111	out -> in
putative TM domain	313	335	in -> out

Report for 2760.m00157

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)