Report for 2768.m00171

 > 2768.m00171, length: 434, copies: 2 

MKAERNNTVLFEIKFGRYNFNGVVIGLVVGTGVLALSLVLTILLRRWKRGIQKKIRRAYFRKNKGLVLERLISSD

ESVAHSTKIFSLEELERAPDHFNSTRILGRGGHGIVYKGILSDQRVVAIKRSKIVEQGEIDQFVNEVAILSQIIH

RNVVKLFGCCFESEVPLLVYEFISNGTLYDILHGDMSTECSLKWDDRVRISLETASALAYLHCAASIPIFHKDVK

SANILLNDNFTTKVSDFGASRSISIDETHVVTIVQGTFGYLDPEYYHTGQLTAKSDVYSFGVILVELLTRKKPIF

LNCSGEKQNLCHYFLQSLRDKTTTDMLDSQVVEEGNLGEIDEFVSLAEACLRLRGEDRPTMKEVESRLQLLRANI

TKKIQDESQKNVEAMQLFPSVYDSTSFTQNVDIGMDADSLTQLASTCHTMEQELVSLTR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	97	300	2.3e-42
Ser/Thr pkinase [Pfam ls]	97	370	1.7e-43
Ser/Thr pkinase [Pfam fs]	341	370	0.31

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	24	384	7e-43
Pto [L. esculentum]	74	369	3e-49
Rpg1 [Hordeum vulgare]	80	368	7e-31
Rpg1 [Hordeum vulgare]	85	368	6e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	20	42	in -> out

Report for 2768.m00171

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)