Report for 2773.m00121

 > 2773.m00121, length: 477, copies: 1 

MRQPQSRKLLQLQALSLLLFIIALHSRLHGCSGQGEAADGSASTAAAPMEEKEKRALYAAIEGFVGKGWNGSALY

PDPCGWSPIQGVSCDLFNGLWYPTVMSIGPVLDNSLRCSADAKFSPQLFDLKRLKTLSFYSCFPATNPTPIPATS

WDKLAGSLETLEFRTNPGLTGPIPASLGRLSSLQSLVFVENNLTGAVPAELGSLVRLRRLVLSGNGLSGQIPASL

GNGHFAEQLLIMDVSNNSLTGSLPSSLGGLKGLLKMDLSNNLLQGSLPPELAGLGSLTLLDLRNNSFTGGLPSFL

QGMASLQDLLLSNNPLGGSLGQLGWERLRGLATLDLSNLGLVGAIPESMAALTRLRFLALDHNRLTGDVPARLAE

LPNIGALYLNGNNLTGTLQFSPAFYQRMGRRFASWDNPGLCYSNAAVDAAHAPPGVTVCKVAGGVGDGRKPEASS

SLMATSSASNLINGFCFFLWMVATSLL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	206	229	1.2
LRR [Pfam ls]	233	256	0.41
LRR [Pfam ls]	257	280	0.34
LRR [Pfam ls]	281	304	0.039
LRR [Pfam ls]	305	329	8.5
LRR [Pfam ls]	354	377	0.99

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	157	181	0.54
LRR [sensitive, ls]	157	181	11
LRR [sensitive, ls]	182	205	0.74
LRR [sensitive, ls]	182	205	14
LRR [sensitive, ls]	206	229	0.059
LRR [sensitive, ls]	206	229	1.2
LRR [sensitive, ls]	233	256	0.021
LRR [sensitive, ls]	233	256	0.41
LRR [sensitive, ls]	257	280	0.017
LRR [sensitive, ls]	257	280	0.34
LRR [sensitive, ls]	281	304	0.002
LRR [sensitive, ls]	281	304	0.039
LRR [sensitive, ls]	305	329	0.43
LRR [sensitive, ls]	305	329	8.5
LRR [sensitive, ls]	330	353	0.77
LRR [sensitive, ls]	330	353	15
LRR [sensitive, ls]	354	377	0.05
LRR [sensitive, ls]	354	377	0.99
LRR [sensitive, ls]	378	404	3.5
LRR [sensitive, ls]	378	404	70

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	79	393	6e-33
FLS2 [A.thaliana]	106	399	5e-29
Xa21 [O. sativa]	116	387	1e-28
Cf-9 [L. pimpinellifolium]	122	391	1e-22
Cf-9 [L. pimpinellifolium]	152	399	2e-12
CLV2 [A. thaliana]	157	393	9e-27
CLV2 [A. thaliana]	157	391	8e-25
CLV2 [A. thaliana]	157	394	2e-23
FLS2 [A.thaliana]	157	393	3e-27
Xa21 [O. sativa]	157	393	1e-24
CLV2 [A. thaliana]	158	416	6e-17
FLS2 [A.thaliana]	158	403	4e-26
Cf-9 [L. pimpinellifolium]	169	412	2e-15
Cf-9 [L. pimpinellifolium]	169	347	3e-15
Cf-9 [L. pimpinellifolium]	169	394	4e-13
CLV2 [A. thaliana]	169	393	2e-18
FLS2 [A.thaliana]	169	394	8e-30
FLS2 [A.thaliana]	169	393	4e-28
Xa21 [O. sativa]	169	384	5e-29
Xa21 [O. sativa]	171	393	1e-20
Cf-9 [L. pimpinellifolium]	181	392	3e-18
Xa21 [O. sativa]	191	393	1e-20
Xa21 [O. sativa]	206	396	1e-20
FLS2 [A.thaliana]	228	396	2e-15
CLV2 [A. thaliana]	233	400	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2773.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)