Report for 2784.m00156

 > 2784.m00156, length: 1020, copies: 1 

MAIRRMRLALSLLCVLMTIGTGTASDEPALLALKAGLSGSSSSALASWNTSASFCGWEGVTCSHRWPTRVAALDL

PSSNLTGTLPPAVGNLTFLRRLNLSSNQLHGEIPPAVGRLRRLLVLDMDHNSISGVIPANLSSCISLTILRIQSN

PQLGGRIPPELGNTLPRLKKLQLRKNSLTGKIPASLANLSSLQHLSLSYNKLEGLIPPGLGDIAGLRYLFLNANN

LSGELPLSLYNLSSLMMLQVGNNMLHGSIPSDIGRMLPGIQVFGLDVNRFTGVIPHSLSNLSTLTDLYLSDNKFT

GFVPPNLGSQLQEFVLANNSFSGQLPRPIGNLSTTLQMLNLDNNNISGSIPEDIGNLVGLSFLDLGFNSILSGVI

PESIGKLTNLVEISLYNTSLSGLIPASVGNLTNLNRIYAFYCNLEGPIPPSLGDLKKLFVLDLSYNHLNGSIPKE

IFELQSLSWFLDLSYNSLSGPLPSEVGSLVNLNGMDLSGNQLSGQIPDSIGNCEVMEALYLEENSFEGGIPQSLS

NLKGLTILNLTMNKLSGRIPNTIARIPNLQQLFLAHNNFSGPIPATLQNLTTLWQLDVSFNKLQGEVPVKGVFRN

LTFASVVGNNLCGGIPQLHLAPCPILNVSKNRNQHLKSLAIALPTTGAILVLVSAIVVILLHQRKFKQRQNRQAT

SLVIEEQYQRVSYYALSRGSNEFSEANLLGKGRYGSVFRCTLDDESALVAVKVFDLQQSGSSKSFEAECEALRRV

RHRCLIKIITCCSSIGPQGQEFKALVFEFMPNGSLDGWIHPKSSNLTPSNTLSLSQRLNIAVDIFDALDYLHNHC

QPPIIHCDLKPSNILLSEDKSAKVGDFGISRILPKSSTKTLQSSKSSIGIRGSIGYIAPEYGEGSTITRAGDTYS

LGILLLEMFTGRSPTDDIFRDSMDLHKFVAASFLHQPLDIADPTIWLHEEENVADVKNESIKTRIIQQCLVSVLR

LGISCSKQQPRERMMLAEAVSEMHATRDEYLRSWMVGHEEHSTVS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	93	116	0.08
LRR [Pfam ls]	117	137	3.5
LRR [Pfam ls]	141	166	2.2
LRR [Pfam ls]	167	190	0.19
LRR [Pfam ls]	191	211	0.33
LRR [Pfam ls]	215	238	2.1
LRR [Pfam ls]	288	308	2.5
LRR [Pfam ls]	335	358	0.0046
LRR [Pfam ls]	359	383	1.8
LRR [Pfam ls]	384	407	0.085
LRR [Pfam ls]	432	456	0.29
LRR [Pfam ls]	481	504	1.4
LRR [Pfam ls]	505	528	10
LRR [Pfam ls]	553	576	0.015
LRR [Pfam ls]	577	602	6.4
Ser/Thr pkinase [Pfam fs]	698	917	1e-50
Ser/Thr pkinase [Pfam ls]	698	975	1.7e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	69	92	0.52
LRR [sensitive, ls]	69	92	10
LRR [sensitive, ls]	93	116	0.0041
LRR [sensitive, ls]	93	116	0.08
LRR [sensitive, ls]	117	137	0.18
LRR [sensitive, ls]	117	137	3.5
LRR [sensitive, ls]	141	166	0.11
LRR [sensitive, ls]	141	166	2.2
LRR [sensitive, ls]	167	190	0.0095
LRR [sensitive, ls]	167	190	0.19
LRR [sensitive, ls]	191	211	0.017
LRR [sensitive, ls]	191	211	0.33
LRR [sensitive, ls]	215	238	0.1
LRR [sensitive, ls]	215	238	2.1
LRR [sensitive, ls]	239	263	1.7
LRR [sensitive, ls]	239	263	33
LRR [sensitive, ls]	264	287	0.8
LRR [sensitive, ls]	264	287	16
LRR [sensitive, ls]	288	308	0.13
LRR [sensitive, ls]	288	308	2.5
LRR [sensitive, ls]	310	333	0.74
LRR [sensitive, ls]	310	333	14
LRR [sensitive, ls]	335	358	0.00024
LRR [sensitive, ls]	335	358	0.0046
LRR [sensitive, ls]	359	383	0.091
LRR [sensitive, ls]	359	383	1.8
LRR [sensitive, ls]	384	407	0.0043
LRR [sensitive, ls]	384	407	0.085
LRR [sensitive, ls]	408	431	0.69
LRR [sensitive, ls]	408	431	14
LRR [sensitive, ls]	432	456	0.015
LRR [sensitive, ls]	432	456	0.29
LRR [sensitive, ls]	481	504	0.072
LRR [sensitive, ls]	481	504	1.4
LRR [sensitive, ls]	505	528	0.51
LRR [sensitive, ls]	505	528	10
LRR [sensitive, ls]	529	552	1.9
LRR [sensitive, ls]	529	552	38
LRR [sensitive, ls]	553	576	0.00075
LRR [sensitive, ls]	553	576	0.015
LRR [sensitive, ls]	577	602	0.32
LRR [sensitive, ls]	577	602	6.4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	8	614	9e-90
Xa21 [O. sativa]	20	809	1e-151
CLV2 [A. thaliana]	26	625	3e-60
Cf-9 [L. pimpinellifolium]	47	584	2e-57
Cf-9 [L. pimpinellifolium]	48	545	2e-46
FLS2 [A.thaliana]	69	523	9e-67
FLS2 [A.thaliana]	72	1002	1e-129
FLS2 [A.thaliana]	119	618	2e-68
FLS2 [A.thaliana]	171	679	2e-56
Cf-9 [L. pimpinellifolium]	233	615	8e-46
CLV2 [A. thaliana]	295	631	2e-36
FLS2 [A.thaliana]	328	617	6e-38
Pto [L. esculentum]	691	945	8e-22
Rpg1 [Hordeum vulgare]	695	912	8e-27
Rpg1 [Hordeum vulgare]	695	912	8e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	639	661	out -> in

Report for 2784.m00156

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)