Report for 2814.m00151

 > 2814.m00151, length: 637, copies: 2 

MQDHILTAFLVVSLLFACIPPAKSADLNSDKQALLAFAASLPHGRKLNWSSAAPVCTSWVGVTCTPDNSRVQTLR

LPAVGLFGPLPSDTLGKLDALEVLSLRSNRITVDLPPEVGSIPSLHSLYLQHNNLSGIIPTSLTSTLTFLDLSYN

TFDGEIPLRVQNLTQLTALLLQNNSLSGPIPDLQLPKLRHLNLSNNNLSGPIPPSLQRFPANSFLGNAFLCGFPL

QPCPGTAPSPSPSPTSPSPGKAKKGFWKRIRTGVIIALAAAGGVLLLILIVLLLICIFKRKKSTEPTTASSSKGK

TVAGGRGENPKEEYSSGVQEAERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKE

VVVGKKDFEQQMEIVGRVGQHQNVVPLRAYYYSKDEKLLVYDYIPSGSLAVVLHGNKATGKAPLDWETRVKISLG

VARGIAHLHAEGGGKFIHGNLKSSNILLSQNLDGCVSEFGLAQLMTIPPAPARLVGYRAPEVLETKKPTQKSDVY

SFGVLVLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTAEVFDVDLLRHPNIEDEMVQMLQVAMACVAAPPD

QRPKMDEVIRRIVEIRNSYSGSRTPPEEKQKDESAAP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	95	118	3.8
LRR [Pfam ls]	119	139	0.13
LRR [Pfam ls]	141	164	0.7
LRR [Pfam ls]	165	186	8.1
LRR [Pfam fs]	187	210	5.6e-05
LRR [Pfam ls]	187	210	0.00093
Ser/Thr pkinase [Pfam fs]	343	555	1.8e-38
Ser/Thr pkinase [Pfam ls]	343	614	3.8e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	95	118	0.19
LRR [sensitive, ls]	95	118	3.8
LRR [sensitive, ls]	119	139	0.0067
LRR [sensitive, ls]	119	139	0.13
LRR [sensitive, ls]	141	164	0.036
LRR [sensitive, ls]	141	164	0.7
LRR [sensitive, ls]	165	186	0.41
LRR [sensitive, ls]	165	186	8.1
LRR [sensitive, ls]	187	210	4.7e-05
LRR [sensitive, ls]	187	210	0.00093

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	7	219	5e-11
Xa21 [O. sativa]	26	203	6e-21
Xa21 [O. sativa]	51	213	9e-17
FLS2 [A.thaliana]	58	206	3e-12
FLS2 [A.thaliana]	63	206	1e-11
Cf-9 [L. pimpinellifolium]	68	203	8e-14
CLV2 [A. thaliana]	68	206	1e-15
FLS2 [A.thaliana]	69	207	2e-13
FLS2 [A.thaliana]	71	206	4e-11
CLV2 [A. thaliana]	74	203	3e-14
FLS2 [A.thaliana]	81	632	8e-54
FLS2 [A.thaliana]	83	203	3e-13
Xa21 [O. sativa]	83	429	1e-19
Pto [L. esculentum]	333	612	1e-31
Rpg1 [Hordeum vulgare]	344	615	2e-16
Rpg1 [Hordeum vulgare]	348	634	4e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	22	out -> in
putative TM domain	258	280	in -> out

Report for 2814.m00151

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)