Report for 2943.m00233

 > 2943.m00233, length: 411, copies: 1 

MAESTAATAPPGDEPEAKGRSNSILLPILGILLVYLLYRYLRPRLRGLRVDRLTSRLPACLRRSRTANTMLPYFA

PIADRLGALQPYLAPIADRLGVGAHGGVCAWAYGRADALVKFPGGEALSVAAILEAPGEVVGKSSHSTLYRAAMR

SGEAAVLLRFVRPACAVTSDEGSAAARRIGAVSHPNLVPLRAFYVGPRGEKLLVHPFYAAGSLRRFLQEGIVDSQ

RWNIICKLSISIVKGLDYLHTGLEKPIIHGNIKTNNILLDANYECKISDFGLYLLLNPAGAQEMLETSAAQGYKA

PELIKMRDATRETDIYSLGVVLLEMLAQKESAKDNTPNPRDILLPVSFKNLVLERKISDAFSSDLVRQSKKSGKE

KNLNAFFELATACCSPSPSLRPNTKFILKKLEEIAK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	130	402	2.3e-13
Ser/Thr pkinase [Pfam fs]	182	326	2.7e-20

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	135	409	9e-21
Rpg1 [Hordeum vulgare]	135	341	2e-13
Rpg1 [Hordeum vulgare]	135	409	8e-11
Pto [L. esculentum]	136	407	7e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	21	38	in -> out

Report for 2943.m00233

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)