Report for 2965.m00178

 > 2965.m00178, length: 422, copies: 2 

MGNCWGAKISSESPCRSASSPSGGTSKYASNSSVSAASVPPTPRSEDEILEAANVKAFAFNELRTATRNFRPDSV

LGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQEGHQGHREWLAEVNYLGQLSHPYLVRLVGYCVEDEQRL

LVYEFMPRGSLENHLFRRSTHFQPLSWNLRMKIALGAAKGLAFLHSDKVKVIYRDFKTSNVLLDAVRSPQNYYPL

CSQDSLTGDLIDRLYFQNYDAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLL

EMLSGRRALDKNRPTGEHNLVEWARPYLMSKRRIFRILDARLGGQYSLAKAQKAATLALQCISVEAKNRPNMEQV

VAVLEQLQDSKETGANPQLQKKSSSKNAGSNGSKPSSKGKPANARLV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	70	377	2e-49
Ser/Thr pkinase [Pfam ls]	70	376	8.9e-49

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	40	382	5e-18
FLS2 [A.thaliana]	52	383	2e-23
Rpg1 [Hordeum vulgare]	56	382	7e-26
Pto [L. esculentum]	58	385	2e-48

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2965.m00178

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)