Report for 3007.m00134

 > 3007.m00134, length: 263, copies: 2 

MEAPFFFFLLLLVSSSPSTARLSAYGVNTEGQLAIVSAPILAFVRALIEIKNLLEDPHGVLKSWDQNSVDPCSWA

LITCSPDSLVTTLEAPGQHLSGLLAPSIGDLTNLETILLQNNNISGPIPAEIGKLANLKRLDLSSNQFHGEIPCS

VGHLKSLQYLRLNNNTLSGPIPSASANLSHLVFLLLCLALHLVIQRFVLQQPEWSDTGIIGKKIQRSGESPHLRA

RLLQDGADGDVPLDQEDFTVPSVLQMLLTERANGERRL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	108	131	0.81
LRR [Pfam ls]	132	155	0.044
LRR [Pfam ls]	156	179	0.032

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	108	131	0.035
LRR [sensitive, ls]	108	131	0.81
LRR [sensitive, ls]	132	155	0.0019
LRR [sensitive, ls]	132	155	0.044
LRR [sensitive, ls]	156	179	0.0014
LRR [sensitive, ls]	156	179	0.032

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	5	186	6e-19
Xa21 [O. sativa]	43	181	5e-12
FLS2 [A.thaliana]	44	184	9e-21
CLV2 [A. thaliana]	46	179	1e-11
FLS2 [A.thaliana]	79	186	3e-13
FLS2 [A.thaliana]	83	184	5e-12
Xa21 [O. sativa]	83	186	2e-14
FLS2 [A.thaliana]	85	184	1e-13
FLS2 [A.thaliana]	85	184	5e-11
FLS2 [A.thaliana]	90	181	9e-13
Xa21 [O. sativa]	95	181	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3007.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)