Report for 3009.m00067

 > 3009.m00067, length: 444, copies: 2 

MPSRRREERGCGCWAAVARGLRGACFRPAGVAAAASGADEKGAAGGSAKGSHVHDAAGCFWVRCSSILFFSITAE

TRYLNASNRELGDHFQTNLDDENGVNASTEKKLLRFTFQELKSATVNFRPDSILGEGGFGYVFKGWIDPNSTSPA

KPGTGLTVAVKSLKQDALQGHREWVAEVDFLGQLHHKHLVKLIGYCIEDDQRLLVYEFMARGSLENHLFRRALPL

PWPCRMKIALGAAKGLAFLHGGPKPVIYRDFKTSNILLDAEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA

PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKKRPTGEQNLVAWARPYLSDRRRLYQLVDPRLGLNYSVRGVQ

KVAQICYHCLSRDTKSRPTMDEVVKHLTPLQDLNDMASASYRPRSSQRDLLHIREKRMNCLYSQLERDE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	123	402	4.8e-53
Ser/Thr pkinase [Pfam ls]	123	404	1.8e-52

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	101	399	1e-52
FLS2 [A.thaliana]	107	406	3e-32
Rpg1 [Hordeum vulgare]	107	403	4e-31
Rpg1 [Hordeum vulgare]	111	402	2e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3009.m00067

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)