Report for 3044.m00256

 > 3044.m00256, length: 302, copies: 2 

MVGALASASTGVMNSVIAKLSKLLEDEYAKLKGVQQQIAFLRDELRAMNATLRVLADVEEDLDPPVKRWRDKVRE

LTFDIDDCIDSFEVRVISHQQERGEGLIKGIIRKLKKLRARHEIANQIEALKAHVVEESKRHKRYDLLKPWSSSS

ATFTIDPRLPALYEEVDKLVGIKGPREHIIEWLTNKRSDRSREDLKVVSIVGCGGLGKTTLANQVFKEIRHQFDC

SAFVSVSRNPDIKKILRDMLKEVNSLDNTQPWSPNDDERQLVNKLRDTLQDKSPDYHCTLIGEKKNNLVITRLVK

EK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	154	277	1.8e-22

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	277	4e-23
Mla1 [Hordeum vulgare].	10	277	9e-43
RPM1 [A. thaliana]	17	277	3e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	24	50

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3044.m00256

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)