Report for 3317.m00078

 > 3317.m00078, length: 454, copies: 1 

MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYITRKVSRRLHSLDLPKHHRRSSSSSPPPMPPPL

PPPPPSANAPTLGKESPSSNSASDGAAAAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPD

GRKVAVKLMDRPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNGAFEKIET

FSIYLVKQRPIFDKNIGHPICRRAHFSRQLISHKADIVGSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVI

HRDFKSSNILLDKDFRARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPDYGVVLLELLTGRVPVDMKRPPGEGV

LVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEADYRPLMADVVQSLVPLVKNRSTPKTCNP

SVQA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	129	349	7.3e-32
Ser/Thr pkinase [Pfam ls]	129	437	3.7e-25

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	109	435	2e-21
FLS2 [A.thaliana]	117	438	5e-21
Pto [L. esculentum]	117	435	8e-38
Rpg1 [Hordeum vulgare]	117	435	3e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	20	42	out -> in

Report for 3317.m00078

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)