Report for 3333.m00172

 > 3333.m00172, length: 259, copies: 1 

MSLPVPKWSGAREARSSSAPEHQGARQFSLDELAQATKSFSEANLVGLGSFGLVYKGLLLDGSVVAIKKRIGAPR

QEFAEEVRKLSEINHRNIVTLIGYCQEGGLQMLVYEYLPNGSVSRHLYDTGKSSMTRLEFKQRLSIAIGAAKGLN

HLHTLVPPLIHKDFKTSNVLVDENFIAKVADAGLVRLLRGYEDVSPSHGFSSSVYQDPEVQSVLQFSESSDVYSF

GVFLLELITGREAACLISPDSRESLAQWVISIDI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	40	235	3.7e-32
Ser/Thr pkinase [Pfam ls]	40	254	9e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	7	255	2e-41
FLS2 [A.thaliana]	17	259	6e-28
Rpg1 [Hordeum vulgare]	17	254	1e-27
Rpg1 [Hordeum vulgare]	27	238	8e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3333.m00172

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)