Report for 3341.m00130

> 3341.m00130, length: 374, copies: 2
MPRQHLSISPLLLSLLCFSFSVQASRPEGRRSVGRARRTLHEVGRGGGVVVAGRAVSAQFATAGADLSSGAAAAA
SAAGRRCTSPTSHRARARSGCAPSSPGSGSSRAAVQLRRVSRGCALFVYRAAEGASSTPTPPEEQTTRAAAAAVA
SPLPALNLTNRGLIGQMSPLGNLTFLKFLFVPANSFTGEIPQSFGNMHHLQIIYLSNNTLQRRMPNLANCSNLKV
LWLNGNNLVGQIPADLPQRFQSLQLSVNSLTGPIPVSVAKITTLKRFSCLYNNIDGSIPNDFAKLPGLVYLHLGA
KIIGRQCAKFFWKPFHSTAVHTLIHMGLNQFLGSIPSGIANIPNLIALELGGNLFTNVIPRSGGGMRGLLFQAG

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]1992210.56
LRR [Pfam ls]2222420.22
LRR [Pfam ls]3443673.6

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]1751980.64
LRR [sensitive, ls]17519815
LRR [sensitive, ls]1992210.024
LRR [sensitive, ls]1992210.56
LRR [sensitive, ls]2222420.0093
LRR [sensitive, ls]2222420.22
LRR [sensitive, ls]2442670.58
LRR [sensitive, ls]24426714
LRR [sensitive, ls]2682911.4
LRR [sensitive, ls]26829132
LRR [sensitive, ls]3443670.15
LRR [sensitive, ls]3443673.6

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
Xa21 [O. sativa]1493667e-17
CLV2 [A. thaliana]1533605e-13
FLS2 [A.thaliana]1533631e-13
FLS2 [A.thaliana]1533664e-13
FLS2 [A.thaliana]1533625e-13
FLS2 [A.thaliana]1553622e-15
Xa21 [O. sativa]1563696e-22
FLS2 [A.thaliana]1683626e-17
FLS2 [A.thaliana]1703691e-17
FLS2 [A.thaliana]1703708e-12
Xa21 [O. sativa]1703609e-15
Cf-9 [L. pimpinellifolium]1723618e-14
Xa21 [O. sativa]1953606e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation