Report for 3443.m00087

 > 3443.m00087, length: 402, copies: 1 

MHRWFIASCGDIRAAAARSSRRRGGDAIAPKSAPPSPSPPPRLRKTVSETAAVMLAVPKDVEEFRTMPAYGTNLE

LFTYDQLRAATADFSPEQIVGEGGFGVVYKGLIHGAVVAVKQLNPLGHQGDREWLTEVSYLGQYNHPNLVELIGY

CCEDDHRLLVYEYMANGSLENHLFRRSCNLSWTTRMKIALDVARGLAFLHGGDRPIIYRDFKTSNILLDTDMKAK

LSDFGLAKEGPRGGKTHVSTRVMGTYGYAAPEYVATGHLTAMSDVYGFGVVLLEMLVGRRALEPPAAGCSKCNLV

DWARPILIRPKKLERIVDRRMALPAPAADYGGGVDAAVERVARLAYDCLSQNPKVRPTMGRVVHVLEAVLADHHH

HAGAAAAAARPAAAAAAATATAGRLYV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	89	364	2.3e-53
Ser/Thr pkinase [Pfam ls]	89	368	1.4e-52

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	74	363	2e-28
Pto [L. esculentum]	77	370	7e-47
Rpg1 [Hordeum vulgare]	77	284	1e-31
Rpg1 [Hordeum vulgare]	77	369	5e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3443.m00087

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)