Report for 3452.m00134

 > 3452.m00134, length: 339, copies: 2 

MAVPRLGFGFHWSNLFFVIKRALVRASCNGLLTKWAEAVPLENITCTEVHVCSPKRQGGMCLHPNLAPMDEIGED

CQSLESDRFPSQGGQTTDRGGWRLHITARRLGVAIVLVDLSKKLPTNGSLDCHLFNNVKVLDWYTRFQVILGVAK

GLHYLHEECHECIIHCDIKPENVLVDADFSPKVADFGLAKLMDRNFSRALTTMRGTIGYLAPEWIAGLPITSKAD

VYSYGMMLFEIISGKRNTELMESKTIKYFPVWAAVRISNGDISEVFDHRMHDTNVQELERACKVACWCIQDNEAH

RPTMQQIVHILQGTRDVVLPPIPAFLQNLVEEYDPASYS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	3	313	2.8e-17
Ser/Thr pkinase [Pfam fs]	122	313	6.7e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	122	312	4e-24
Rpg1 [Hordeum vulgare]	123	308	2e-22
Rpg1 [Hordeum vulgare]	123	322	3e-21
FLS2 [A.thaliana]	141	312	6e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3452.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)