Report for 3460.m00058

 > 3460.m00058, length: 454, copies: 1 

MGHHMTGRIYLIILRCRISGIQVHGDNLVDHGSSGVIRIFFLDLQRYLIVIDNVWSISAWEAILSRLLDNKCSGR

IIVTTRIEHVARACSSASLEEDYYIHRIKPLQFEDAKKLFINAVFGPKQDCPQHLVETMHKILTRCTGLPLAIVC

IGRLLAGYRACMMYLSIFLEDYDIGKNRLLYRWIAEGLVSEQRGLTLIEVAEAYFDDLVSRHMIQPPCVEPYGKE

PKCRVHDMMLDITVSKALESNFVRLVGNQCQGTNSYGSVRRLSIHSDDQGYGIDNTKLSHIRSLTTFRPSGHRRL

LDKLSEFTLLRVLDLQDYITELPSQINKLHHLYTLWLYETLLNKVPESLVDLEKLERVGFTNRHDPTILLRLPRH

IRKMKVLQQIYSFELRKDDVQLAREIGDLVQLQVLGVILSCSNCSNEQVLIELAKSIGRSPRVVYGWHAFSGKQH

EFSP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	194	3.9e-05
NB-ARC [Pfam fs]	41	156	1.4e-12
NB-ARC [Pfam fs]	161	194	1.8e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	41	424	2e-27
Mla1 [Hordeum vulgare].	41	412	4e-40
Pib [Oryza sativa].	42	402	4e-32
I2 [L. esculentum]	45	410	2e-13
Pi-ta [Oryza sativa]	45	356	4e-36

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3460.m00058

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)