Report for 3557.m00133

 > 3557.m00133, length: 393, copies: 1 

MARMRVSAAAAAALFVAVVVASPLLASSQQPAMAPAAAAAPTNNSRLEKAYVALQALKRAITDDPKNLTHSWCGP

EVCGYFGVYCAAAPDDPCARTVAGVDLNHGDLAGTLPEELGLLTDLAVFHLNSNRFCGSLPDSLRNLHRLHEIDV

SNNHLSGSFPSQLLCLPDLKYVDLRFNNLCGEVPAAIFEKKIDALFINNNNFDFKLTESFSNSTASVIVLANLPK

LGGCLPSSIGDMAETLNELVLLNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLA

GEIPDSICALPHLKNFTYSHNFFCGEPHRCLEVPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHCDAHGCIAPL

SPPPPPPPVHYAPPPPVY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	144	167	0.27
LRR [Pfam ls]	264	287	0.39
LRR [Pfam ls]	288	311	3.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	96	119	3.7
LRR [sensitive, ls]	96	119	120
LRR [sensitive, ls]	120	143	0.48
LRR [sensitive, ls]	120	143	15
LRR [sensitive, ls]	144	167	0.0087
LRR [sensitive, ls]	144	167	0.27
LRR [sensitive, ls]	168	192	0.76
LRR [sensitive, ls]	168	192	24
LRR [sensitive, ls]	240	263	3.4
LRR [sensitive, ls]	240	263	110
LRR [sensitive, ls]	264	287	0.013
LRR [sensitive, ls]	264	287	0.39
LRR [sensitive, ls]	288	311	0.11
LRR [sensitive, ls]	288	311	3.4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	14	326	2e-23
CLV2 [A. thaliana]	51	326	1e-19
FLS2 [A.thaliana]	53	325	5e-22
Xa21 [O. sativa]	78	325	9e-17
CLV2 [A. thaliana]	95	346	2e-13
FLS2 [A.thaliana]	95	325	1e-19
FLS2 [A.thaliana]	96	321	5e-21
Xa21 [O. sativa]	96	326	3e-20
FLS2 [A.thaliana]	99	326	8e-17
Cf-9 [L. pimpinellifolium]	100	321	9e-15
Cf-9 [L. pimpinellifolium]	100	325	5e-14
Cf-9 [L. pimpinellifolium]	100	345	9e-13
Cf-9 [L. pimpinellifolium]	100	304	4e-12
CLV2 [A. thaliana]	100	325	1e-19
CLV2 [A. thaliana]	100	333	8e-14
FLS2 [A.thaliana]	100	326	1e-20
FLS2 [A.thaliana]	100	349	8e-20
FLS2 [A.thaliana]	100	306	1e-19
FLS2 [A.thaliana]	100	325	6e-18
Xa21 [O. sativa]	100	304	2e-21
Xa21 [O. sativa]	100	321	2e-16
Xa21 [O. sativa]	100	231	1e-11
Xa21 [O. sativa]	102	325	5e-20
Xa21 [O. sativa]	102	325	9e-20
FLS2 [A.thaliana]	103	326	5e-19
Cf-9 [L. pimpinellifolium]	113	321	7e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	26	in -> out

Report for 3557.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)