Report for 3714.m00121

 > 3714.m00121, length: 292, copies: 1 

MADSRDPVWKHGESIAPGWRSSMFVARSTKANAGDMATMRVLAQFLGADRALGWGRASPDPCDGSWLGITCDASG

YVVYIIANNSGLTGHLPRETRNLSMLAAIYLNNNSLSGDVPPLGPNLMEISLSYNRFMSISPEFFKDMEIVFSLS

AVNANIIGPIPEFVGDHFKYLGTLKLQGNSLFGHIPTSFASTRIRSVQLQDQRGLDKLSGPIFMLNATNIVYLDL

HGNQFTGPIPNLASNIEMEYIDLSKNALTGDVPQSLMQLHHLRVLNLSDNSLCGQLPKFIKKYDCKD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	121	144	0.4
LRR [Pfam ls]	219	238	0.58
LRR [Pfam ls]	242	265	4.1
LRR [Pfam ls]	266	289	3.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	76	99	3.5
LRR [sensitive, ls]	76	99	95
LRR [sensitive, ls]	121	144	0.015
LRR [sensitive, ls]	121	144	0.4
LRR [sensitive, ls]	170	193	1.7
LRR [sensitive, ls]	170	193	45
LRR [sensitive, ls]	219	238	0.022
LRR [sensitive, ls]	219	238	0.58
LRR [sensitive, ls]	242	265	0.15
LRR [sensitive, ls]	242	265	4.1
LRR [sensitive, ls]	266	289	0.12
LRR [sensitive, ls]	266	289	3.2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	65	282	8e-17
Xa21 [O. sativa]	65	282	1e-10
Xa21 [O. sativa]	74	282	3e-11
FLS2 [A.thaliana]	77	283	2e-14
FLS2 [A.thaliana]	77	282	2e-13
FLS2 [A.thaliana]	77	283	6e-12
Xa21 [O. sativa]	79	282	6e-13
FLS2 [A.thaliana]	80	287	2e-15
FLS2 [A.thaliana]	81	292	2e-14
Cf-9 [L. pimpinellifolium]	83	283	4e-12
CLV2 [A. thaliana]	89	282	2e-12
Cf-9 [L. pimpinellifolium]	96	285	5e-11
CLV2 [A. thaliana]	101	289	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3714.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)