Report for 3740.m00126

 > 3740.m00126, length: 398, copies: 1 

MAIKVKYQVKKNWMGDPCVPKTLAWDSLTCSYSTSIRPRITSLNLSSSDLRGDISSSFANLKGVQYLNLSNNNLT

GSIPDALSQLPLLSVLDLAGNQLSGSIPSGLLKRIQDGSLDLSSSLQLENRRFTYRELEMMTDNFQLELGRGGFG

CVYDGFLEDHTRVAVKLMFKNSKQGDKEFLGEDGDNMALVYEYMSEGTLQEHIAVPKIFRFYVHEENSRRRFLPW

RRRLQIALESAQGKYLMTMQPTTKSDVYSFGVVLLELVTGKPALLRDLDNTSIIQWVQQHLARGNIEDVVDARMH

GDHDINSVWKVVDIALKCTMQESIHRPTMTGVVAMLQECIELENRHLKDYAANSENHNSSYNTYGVDQSTNVIQS

NDAFEVGHNIARVPTMATGPVAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	39	62	0.29
LRR [Pfam fs]	63	86	3e-05
LRR [Pfam ls]	63	86	0.0005
LRR [Pfam ls]	87	111	0.2
Ser/Thr pkinase [Pfam fs]	143	182	0.013
Ser/Thr pkinase [Pfam fs]	247	269	6.1e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	39	62	0.011
LRR [sensitive, ls]	39	62	0.29
LRR [sensitive, ls]	63	86	1.8e-05
LRR [sensitive, ls]	63	86	0.0005
LRR [sensitive, ls]	87	111	0.0073
LRR [sensitive, ls]	87	111	0.2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	119	343	2e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3740.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)