Report for 3843.m00291

 > 3843.m00291, length: 270, copies: 2 

MAGAAVSASSGAMNSVIAKLASLLTDEYTHLKGVKSGIRWLRDELGSMNAVLQRLGDMDDDQIDVQTKEWRNKVR

ELSYDIEDCIDRFLQNHSSGDANANLLQKGVRKMKKLWENHQIGDEIKQLKERVIEEKERHERYKIADRLMVAPQ

HVRLDPRVPALYEQAKNLVGIDKPREQIIGWIKSEEKQLKVVSIFGTGGLGKTTLAMEVYHKIDESFDCRAMVSV

SRTPDIKKLLRDILFQINEREYEKSNDWEMEQLIPKLRKNLEDKR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	153	239	6.3e-19

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	270	3e-26
RPM1 [A. thaliana]	9	270	5e-13
Mla1 [Hordeum vulgare].	10	270	2e-42

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	120	140

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3843.m00291

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)