Report for 3880.m00243

 > 3880.m00243, length: 454, copies: 1 

MDSSSSFVLVVLILQAVVIGCSSLDELPVQLSNRRLLHDRNHAALLYKDHFPTVGNMTFPTSHQLQNDPNYKPLD

SSSHPAEASANKGSSKGFKKWLYIVVIPVAGLIMLAGMAWMFLPCRKKSVATIGPWRTGLSGQLQKAFVSGVPQL

QRPELERACEDFSNIVASHPYYTVYKGTLSSGVEIAVVSTTIKSSKDWSKHCEDCFRKKIESLSRINHKNFINLL

GFCEEEEPFTRVMVFEYAPNGTLYENLHDEAFDHIDWRSRMRIIMGIAYCIQHMHELNPANVHPDLHSSAVFLSE

DCAAKIADLSVWQEVVSDGKKSTANNDHHEPISARLAGNVYSFGILLLEIISGKPPYSENEGSLANLALGCIIKG

RSIASMLDSVLESHKENELDVICQIIMECIQSDPTKRPGMREITTRLRETIAISPDAATPRLSPLWWAEVEVLSP

VEPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	160	418	2.1e-10
Ser/Thr pkinase [Pfam fs]	173	255	6.7e-06
Ser/Thr pkinase [Pfam fs]	340	418	0.0065

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	26	422	3e-23
Pto [L. esculentum]	154	428	4e-16
Rpg1 [Hordeum vulgare]	155	422	2e-20
Rpg1 [Hordeum vulgare]	163	422	8e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	24	out -> in
putative TM domain	96	118	in -> out

Report for 3880.m00243

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)