Report for 3960.m00133

 > 3960.m00133, length: 430, copies: 1 

MIGSRGGGGGAAPRPRRRSDPGDSRDLSVATTTESYNSERSVGSGGGRGTAFLDAFRSCFVSGEAQARSPETSSL

SDDFHPSQQLSQSISSQGSSSGSNFEMRRSMKGLYNPMHRNSSGKEIPGSTQFSLPQIQKATKNFSPNLKIGQGG

SGTVYKGQLNDGTLIAVKRAKKNVYDKHMGREFRNEIETLQCIEHLNLVRFHGYLEFGGEQLIIVEYVPNGNLRE

HLDCVNGKILEFSLRLDISIDVAHAVTYLHTYSDHPVIHRDIKSSNILLTNNCRAKVADFGFAKLAPTDASHVST

QVKGTAGYLDPEYLRTYQLNEKSDVYSFGVLLVELITGRRPIEPRRAIVERVTAKWAMEKFVEGNAIQTLDPNLE

ATDAINLAVEKTYELALQCLATTKRNRPSMRRCAEILWSIRKDFRELDIPTASLN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	140	341	5.9e-41
Ser/Thr pkinase [Pfam ls]	140	414	6.5e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	117	415	8e-29
FLS2 [A.thaliana]	120	421	9e-35
Pto [L. esculentum]	125	420	3e-48
Rpg1 [Hordeum vulgare]	127	405	2e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3960.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)