Report for 4029.m00243

 > 4029.m00243, length: 402, copies: 1 

MEMILDALASYLGEQFAKMVKDEAGMLLGASGEVEKLTGMLSRLKKFLANAERRHITDAKEGEYVHEWVRKLKDA

MYDATDIVDDVHLKSEQRRERYASPYPGSCSNSSLLWCLQDPLFAHRIGSRVKELNERMDGLFKQAEADQQADTD

RLKSSSTPGNPHSGNPRRTAPGIIHEDIVGDKIEEDKRMLVDWLINHDKKYLVVAIQGVGGIGKTTLAKKIFHDQ

AIQDTFDVKIWLSVTQDFNEAHLLKTAIAMAKSDKQQIPAVEDMALLEDALVEALRGKMLLLVMDDMWTEKAWDN

GLRVPITKACAPGTCVLVTTRNEDVAKVMKAAHTHQVTKLRLDDSWTLLQKQILPDIGGKGGSMRTSEKFVPIFV

FNAQKESCNPFFYLKQQESLLLCYINI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	162	351	1.3e-38
NB-ARC [Pfam ls]	162	402	5e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	19	355	9e-16
I2 [L. esculentum]	34	361	1e-19
Pi-ta [Oryza sativa]	68	340	9e-11
Xa1 [Oryza sativa]	129	350	4e-15
Mla1 [Hordeum vulgare].	198	359	8e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	126	146

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4029.m00243

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)