Report for 4141.m00178

 > 4141.m00178, length: 388, copies: 1 

MDGVLQALVVAVAASAAILFPCLAIAFFCRHRHRHRVVVKPRCRCLQPLSSAATLPVTAPSSRSCECVSSWSFYG

GGGDAGDRSLKMLSLDDLAGATGGFSPDNIIGDGSFGFVYRAVLPDGARVAVKRLSAXHASGGEGNREFRAELEV

LGTLSHPNLARLLGFCAAGADRLLVYELLERGSLDAWLYGDAAGAAGQLPWPARLRIARGVAAALAFLHHGNETA

ILHRDIKASNVLLDEGFEAKLADFGLARIAAGGAAESHLSTQAAGTAGYMAPELRAGVGTSVKADVYSFGVLLME

MVTGRRPSWPVKINMKGKEVEMLKWARDKVDKGQALEILDRQMGIQWEGREADQDEMIAYLDVARRCTEESPKHR

PSMEEVVEMLNKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	100	307	4.7e-52
Ser/Thr pkinase [Pfam ls]	100	385	1.4e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	85	388	4e-34
Pto [L. esculentum]	90	382	9e-39
Rpg1 [Hordeum vulgare]	93	388	3e-22
Rpg1 [Hordeum vulgare]	97	388	1e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 4141.m00178

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)