Report for 4274.m00154

 > 4274.m00154, length: 264, copies: 1 

MQELQLLLVLAALVLLSFLSPATSCTEQEKSSLLQFLRELSPDSSSKFSRSWQSGTSCCTWEGIACGSNGTVTEL

SLPSMALEGPISVSIANLTGLRRLDLSYNSLSGELPPELISSASVAFLDVSFNRLNGELQESSPSLPHHPLQVLN

ISHNFFAGEFPSTIWEKKSDLVAINASHNTFSGALPSSFCISSPSFAVLDLSYNLFSGSIPAEIGKCSSLRVLKA

SNNEINGSLSDELFDASMLEHLSFLKNGLEGELDGKCSL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	95	119	0.0026
LRR [Pfam ls]	195	218	2
LRR [Pfam ls]	219	243	5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	71	94	2.7
LRR [sensitive, ls]	71	94	56
LRR [sensitive, ls]	95	119	0.00012
LRR [sensitive, ls]	95	119	0.0026
LRR [sensitive, ls]	145	169	1.3
LRR [sensitive, ls]	145	169	27
LRR [sensitive, ls]	170	194	3
LRR [sensitive, ls]	170	194	62
LRR [sensitive, ls]	195	218	0.098
LRR [sensitive, ls]	195	218	2
LRR [sensitive, ls]	219	243	0.24
LRR [sensitive, ls]	219	243	5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	4	228	4e-12
FLS2 [A.thaliana]	8	258	8e-20
CLV2 [A. thaliana]	28	258	5e-17
CLV2 [A. thaliana]	54	258	3e-20
Xa21 [O. sativa]	59	239	9e-22
FLS2 [A.thaliana]	64	258	2e-12
Cf-9 [L. pimpinellifolium]	69	258	8e-14
FLS2 [A.thaliana]	69	236	1e-11
Xa21 [O. sativa]	69	258	1e-17
FLS2 [A.thaliana]	71	258	3e-17
FLS2 [A.thaliana]	72	258	2e-15
Cf-9 [L. pimpinellifolium]	75	234	1e-10
CLV2 [A. thaliana]	75	258	7e-16
CLV2 [A. thaliana]	75	256	4e-15
FLS2 [A.thaliana]	75	261	6e-15
FLS2 [A.thaliana]	75	263	4e-13
Xa21 [O. sativa]	75	258	1e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Conotoxin	4	67	0.0086

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4274.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)