Report for 4406.m00169

 > 4406.m00169, length: 422, copies: 1 

MAVVVPTLAVCVVAAALLWLWRQRKRRRKNSPPPANNDSDQYSSDGQRQHGTADLERAVTGGGPRRYQFHELAAA

TRDFAEEEKLGQGGFGNVYLGRLAVGTGGGEDHQEVAVKKFSMDSMSQGRREFEAEVRIISQLRHRNLVQLHGWC

DSRKGLLLVYELVAGGSLDKHIYNTDRILTWPERYKIIMGLGAALRYLHQEWEQCILHGDIKPSNIMVDSSYNTK

LGDFGLARLVDHGKAWQATRSVLGTAGYIDPEFVNTRRPSTESDVYSFGVVLLEIVCAKPPVVLQENEPSFVLLR

WVWNLYSQNAILDAVDERLRVVGVVRDERQMERVLVVGLWCAHPDLSERPSIARAMNVLQSDDARLPDLSPQMYK

SKASPPPRDVAVGVDYGGVSTGSTFSGSGVPTSATTTTTRSSGSFVG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	79	286	1.2e-45
Ser/Thr pkinase [Pfam ls]	79	361	9.5e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	65	352	5e-27
Rpg1 [Hordeum vulgare]	65	361	3e-30
Pto [L. esculentum]	66	319	1e-37
Rpg1 [Hordeum vulgare]	66	284	6e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	4	21	out -> in

Report for 4406.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)