Report for 4508.m00120

 > 4508.m00120, length: 424, copies: 1 

MTLTATNGDDSSRKNTVLAVVLSLSGVVLLALAAFFVWDKLFRNKVANPVRFQSPQRFTSFDSSIPLNQVQDRKM

EDETRHSNELNVTLFDFNTIAFSTDNFANLAKLGEGGFGPVYKGELDGGQTVAVKRLSKFSTQGLDEFKNEVMLI

ARLQHVNLVRLLGCCIHGEERMLVYEYMENKSLDNFIFDKARSAQLNWSKRFNIILGIARGLLYLHQDSRFKIIH

RDLKAGNILLDGDMNPKISDFGVARIFGDDTDSHTRKVVGTYGYMSPEYAMDGVFSVKSDVFSFGVLVLELVSGR

KNRGMYSSGEQTSLLSHAWRLWREGNALALLDEAVAGGGGGGGYSRSEVLRCVQVGLLCVQERPEDRPHMAAVFM

MLGNLSAVVPQPRHPGFCSDRGGGGGSTDGEWSSTCTVNDVTVTIVEGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	102	299	1.9e-59
Ser/Thr pkinase [Pfam ls]	102	375	6.1e-55

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	12	380	1e-33
Pto [L. esculentum]	82	377	1e-41
Rpg1 [Hordeum vulgare]	90	387	1e-42
Rpg1 [Hordeum vulgare]	99	383	7e-34

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	16	38	in -> out

Report for 4508.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)