Report for 4524.m00148

 > 4524.m00148, length: 437, copies: 1 

MAMALQDEVAQNLRWIAHAIQPHAHRTPLAMDGRMKTGKRRRMRVVEFATAGSVAFLLCLALSVWCLLRRRQWRR

NNAKLTVKMARKHLPKDARFFRGKPIEDELELEAAGPRRFHYGELAAATANFSDDRRLGSGGFGSVYRGFLNGGD

VAVKRVAETSRQGWKEFVAEVRIISRLRHRNLVPLVGWCHDGGDELLLVYELMPNGSLDAHIHSSGNVLPWPARY

EVVLGVGAALMYLHHEAEQRVVHRDIKPSNVMLDASFSARLGDFGLARLIDDGRRSRTTGIAGTMGYIDAECFLL

AGRASVESDVYSFGVVLLEVACGRRPAVVINGGEDAIHLTQWVWDTHGGAAGGGILDAADTRLNGEFDVAEMERV

LAVGLWCAHPDRGLRPSIRQAVSVLRFEAPLPSLPVRMPVATYGPPVSTASAPTSNDTSAGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	127	326	4.4e-52
Ser/Thr pkinase [Pfam ls]	127	402	7e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	39	400	2e-29
Rpg1 [Hordeum vulgare]	113	400	2e-28
Pto [L. esculentum]	114	357	4e-43
Rpg1 [Hordeum vulgare]	115	324	5e-27
Xa21 [O. sativa]	117	217	3e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	45	67	in -> out

Report for 4524.m00148

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)