Report for 4696.m00149

 > 4696.m00149, length: 1077, copies: 2 

MAIPILRRIIPLLMLLLTLWPVPSSSLPDEYSDREALLQFRAALSVSDQLGSLSSWNGSTGSDFCRWGGVTCSRR

HPGRVTSLNLSSLGLAGSISPVIGNLTFLQSLDLFNNTLSGDVYFTSQLHRLHYLELAYNDFSGDLPVGLCNCSN

LVFLSVEANELHGAIPSCLGSLLQLKVLYLGENNLTGTVPPSLGNLTMLLQIALYQNQLEGTIPEGLSGLRYLQY

IQASRNSLSGTLPPLFFNISSLQYLGFSSNKLHGRLPPDAGTRLPNLQVLRLGGIGNNFSGTIPASLSNATEIQV

LGLARNSFEGRIPPEIGKLCPVSVQMGSNKLQANDAGDWEFLRYFTNCTRLQVIDLSDNTLGGILPSFIANLSRS

IQWLSMAKNQISGIIPPGIGSLKGIEDLEFQGNNLFGDIPGDIGRLRNLKVLWLNMNNMSGGIPFSIGNLTQLLT

LDLSNNQLNGSIPKSLGSMERLTNLDLSSNRLVESIPDVIFSLPSLTDSLLLSDNYLSGALPPKVGNLRRATTLS

LSRNNLSGKIPTTLGDCASLVYLALDSNHFTGSIPPSLGNLRGLSILNLTRNALSGSIPQQLSNIHGLQQLYLAH

NNLSGTIPQFLEKSSALIELDLSYNHLSGEVPSHGLFANMSGFSVLGNYALCGGIAELNLPPCEVKPHKLQKQML

LRILLLVSGIVICSSLLCVALFLFKGRKQTDRKNATSDLMLNEKYPRVSYHELFEATDGFAPANLIGAGKYGSVY

RGNLSLPSAVNVVVAVKVFTLQHASSSRSFMAECEALRNVKHRNLIKIITCCSSMDSRGNDFRALVFEFMPKYSL

DRWLHPRIHEQTHKLSIAQLLNIAVDVADAIDHLHNNSCPTVIHCDLKPSNILLSADWTAYVADFGLAKLVGESI

EKSGLSAGDSSTVGIRGTIGYVAPEYGAGGQASVVGDAYSFGITLLEMFTGKAPTDNMFREGLTLHLHAEMTLPE

KISEIIDPALLHVEQYDTDAEILTCLSSVIEVGVSCSKENPSERMDMKHAAAKLNRIREEMRYDTIVRVLIPYLA

IPKPSGSSLPPPQHRQTTQASIRIWMQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	79	102	10
LRR [Pfam ls]	126	149	1.3
LRR [Pfam ls]	174	197	0.004
LRR [Pfam ls]	222	245	6.5
LRR [Pfam ls]	246	270	0.23
LRR [Pfam ls]	297	321	9.5
LRR [Pfam ls]	350	373	0.017
LRR [Pfam ls]	375	398	5.5
LRR [Pfam ls]	399	422	8.9
LRR [Pfam ls]	423	446	8.6
LRR [Pfam ls]	447	470	0.1
LRR [Pfam ls]	471	494	0.065
LRR [Pfam ls]	544	567	0.18
LRR [Pfam ls]	568	591	6.5
LRR [Pfam ls]	592	615	0.35
LRR [Pfam ls]	616	641	0.88
Ser/Thr pkinase [Pfam fs]	735	988	3.4e-41
Ser/Thr pkinase [Pfam ls]	735	1025	2e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	79	102	0.51
LRR [sensitive, ls]	79	102	10
LRR [sensitive, ls]	103	125	2
LRR [sensitive, ls]	103	125	40
LRR [sensitive, ls]	126	149	0.066
LRR [sensitive, ls]	126	149	1.3
LRR [sensitive, ls]	150	173	1.9
LRR [sensitive, ls]	150	173	37
LRR [sensitive, ls]	174	197	0.0002
LRR [sensitive, ls]	174	197	0.004
LRR [sensitive, ls]	198	221	0.96
LRR [sensitive, ls]	198	221	19
LRR [sensitive, ls]	222	245	0.33
LRR [sensitive, ls]	222	245	6.5
LRR [sensitive, ls]	246	270	0.012
LRR [sensitive, ls]	246	270	0.23
LRR [sensitive, ls]	271	296	2.7
LRR [sensitive, ls]	271	296	54
LRR [sensitive, ls]	297	321	0.48
LRR [sensitive, ls]	297	321	9.5
LRR [sensitive, ls]	350	373	0.00087
LRR [sensitive, ls]	350	373	0.017
LRR [sensitive, ls]	375	398	0.28
LRR [sensitive, ls]	375	398	5.5
LRR [sensitive, ls]	399	422	0.45
LRR [sensitive, ls]	399	422	8.9
LRR [sensitive, ls]	423	446	0.44
LRR [sensitive, ls]	423	446	8.6
LRR [sensitive, ls]	447	470	0.0052
LRR [sensitive, ls]	447	470	0.1
LRR [sensitive, ls]	471	494	0.0033
LRR [sensitive, ls]	471	494	0.065
LRR [sensitive, ls]	496	519	1.4
LRR [sensitive, ls]	496	519	27
LRR [sensitive, ls]	520	543	0.57
LRR [sensitive, ls]	520	543	11
LRR [sensitive, ls]	544	567	0.0093
LRR [sensitive, ls]	544	567	0.18
LRR [sensitive, ls]	568	591	0.33
LRR [sensitive, ls]	568	591	6.5
LRR [sensitive, ls]	592	615	0.018
LRR [sensitive, ls]	592	615	0.35
LRR [sensitive, ls]	616	641	0.045
LRR [sensitive, ls]	616	641	0.88

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	10	839	1e-162
CLV2 [A. thaliana]	21	660	6e-62
Cf-9 [L. pimpinellifolium]	24	623	5e-50
FLS2 [A.thaliana]	35	661	5e-84
Cf-9 [L. pimpinellifolium]	79	661	5e-50
CLV2 [A. thaliana]	80	436	2e-33
FLS2 [A.thaliana]	80	582	5e-67
FLS2 [A.thaliana]	90	1033	1e-127
Cf-9 [L. pimpinellifolium]	420	648	2e-13
CLV2 [A. thaliana]	520	661	3e-12
Pto [L. esculentum]	701	985	6e-20
Rpg1 [Hordeum vulgare]	724	1004	2e-19
Rpg1 [Hordeum vulgare]	732	1032	2e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	677	699	out -> in

Report for 4696.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)