Report for 4784.m00183

 > 4784.m00183, length: 657, copies: 1 

MAAAARAAAVAVVVVVVVLGVEVAAALNTDGLALLALKFAVSEDPNGALSTWRDADNDPCGWSGVTCVDGGGGRV

AGVELANFSLAGYLPSELSLLSELVTLSLPYNQLAGQIPVAITALQKLAALDLAHNLLSGQVPAGIGRLVSLSRL

DLSSNQLNGSLPPAIAGLPRLSGVLNLSYNHFTGGIPPEFGGIPVAVSLDLRGNDLAGEIPQVGSLVNQGPTAFD

DNPRLCGFPLKVECAGEKEDPRIPEANGGMNPGAAAAVGRPPRRRSSPTVPVLAAIVVVAIVAGVILQWQCRRRC

AAATARDEEKESAKDKSGAVTLAGSEERRNGGEEGEVFVAVDDGFGMELEELLRASAFVVGKSRGGIVYRVVPGH

GPAVAVRRLSEPDDGDGGSDSGWRRRRAFETEAAAIGRARHPNVARLRAYYYAPDEKLLIYDYLSNGSLHSALHG

GPTASPTPLPWSMRLSIVQGAARGLAYLHECSPRRYVHGCIKSSKILLDDELRAHVSGFGLARLVAGGAHKAAAA

QSKKLGGAACALRGGGGALAYVAPELRTPGGAAAAATQKGDVFALGVVLLEAVTGREPTEGEGGLELEAWVRRAF

KEERPLSEVVDPTLLGEVHAKKQVLAVFHVALGCTEPDAELRPRMRAVAESLDRINA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	122	145	5.9
LRR [Pfam ls]	146	169	0.0057
Ser/Thr pkinase [Pfam ls]	358	648	9.3e-13
Ser/Thr pkinase [Pfam fs]	394	587	3.1e-14

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	98	121	0.54
LRR [sensitive, ls]	98	121	14
LRR [sensitive, ls]	122	145	0.22
LRR [sensitive, ls]	122	145	5.9
LRR [sensitive, ls]	146	169	0.00021
LRR [sensitive, ls]	146	169	0.0057
LRR [sensitive, ls]	171	194	0.42
LRR [sensitive, ls]	171	194	11
LRR [sensitive, ls]	195	217	1.5
LRR [sensitive, ls]	195	217	39

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	28	218	1e-10
Xa21 [O. sativa]	30	211	9e-23
FLS2 [A.thaliana]	33	227	7e-21
FLS2 [A.thaliana]	70	211	5e-12
Xa21 [O. sativa]	74	449	8e-19
FLS2 [A.thaliana]	77	212	1e-14
Cf-9 [L. pimpinellifolium]	78	212	3e-12
CLV2 [A. thaliana]	78	211	6e-20
CLV2 [A. thaliana]	78	211	5e-14
CLV2 [A. thaliana]	78	211	5e-11
FLS2 [A.thaliana]	78	217	4e-17
FLS2 [A.thaliana]	78	212	4e-14
FLS2 [A.thaliana]	78	215	2e-12
FLS2 [A.thaliana]	78	212	1e-10
Xa21 [O. sativa]	78	211	2e-17
Xa21 [O. sativa]	78	211	3e-15
Xa21 [O. sativa]	78	218	7e-15
FLS2 [A.thaliana]	79	655	3e-35
Cf-9 [L. pimpinellifolium]	80	244	3e-14
FLS2 [A.thaliana]	80	211	3e-13
Xa21 [O. sativa]	84	218	9e-12
Pto [L. esculentum]	343	653	4e-21
Rpg1 [Hordeum vulgare]	355	656	4e-13
Rpg1 [Hordeum vulgare]	359	655	3e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 4784.m00183

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)