Report for 4884.m00198

 > 4884.m00198, length: 207, copies: 1 

MAINLSISVPTGPAFRNAPHIGREMEKSHLIQLVSQDGENHHIISIWGMIGVGKTSFIRSVYESEEITSMFEQCA

WVTVSHPFNLHNFITSLAHELDSNDFSVLGNGLQKSEESIKASKRRCLLVLDDVSSIEEWSLIKPHLPSETNTKI

IVTTREASIAEHCSMTCKNIYKLEGLKEDAALALFKNKAFLLVLKRILLFYAWQSNF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	2	190	5.8e-22
NB-ARC [Pfam ls]	2	207	1.3e-06

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	21	190	7e-11
Pib [Oryza sativa].	21	190	9e-24
I2 [L. esculentum]	22	190	2e-11
Pib [Oryza sativa].	23	193	4e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4884.m00198

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)