Report for 4926.m00062

 > 4926.m00062, length: 407, copies: 1 

MAVAEVGGMLASAVLKVATQKLGAAIAGRVMLQWNFDKDLEGMKATLESVDAVLRDAERRSIRDAAVRLWLRRLK

DAAYDISDMLDDLENITSKSDAGKLGCVMIPNLTIAHKITLANKMKTISDELKEITNQHLSFRFTEDSSYKEHRV

TDKRETSSKVEEALVVGRTAEKRIIISSLSKRMTEETVILPIYGIGGIGKTTLAKLVFNASNFRDYSKVWIYVSQ

TFDLNKISNSIISQVSESESQLTEREMINRRLDELLSGRKILIVLDDLWERDQFQLDDLKTMLKVGRGSRVIAIV

TTRDKDIAEKICTTEPYKLEPLTDDMCWKIIKEKSVFEARDDKEQLENIGREIASKCGGVALAAKSLGYTLQPMK

FDEWVSVRNNDIWKASTFECTSLPYHNVLASL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	149	371	6.3e-36
NB-ARC [Pfam ls]	149	407	2.7e-14

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	6	407	9e-36
RPM1 [A. thaliana]	10	389	2e-19
Mla1 [Hordeum vulgare].	21	371	8e-17
Pi-ta [Oryza sativa]	64	363	7e-13
Xa1 [Oryza sativa]	112	390	2e-31
N [N. glutinosa]	118	381	9e-13
Pib [Oryza sativa].	150	385	1e-10
RPS2 [A. thaliana]	165	380	4e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4926.m00062

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)