Report for 4944.m00173

 > 4944.m00173, length: 264, copies: 1 

MSTMVVSAYKGVIDSVLAKLRELMGGDMCANLIGVSSRDILFLRDELPAMSALLEKLDDAEELDSEAKNWRNQVR

EMTYDIEDCIDDFSNNITSVDAKTGFLYKASQFLKTCRAHLEAAWQIKELKTRLQEINERRKRYKVGHYISNTTS

VTVDPRISAFYKETAGLVGIDSPKRELTKLVMDEETQLKVMSIVGFGGLGKTTLASQVYREVGVQFNCKAFVSVS

QKPDMVRLLTSLVFQLQQHPSHACGVQELIDHFKGYFMD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	152	226	3.2e-16

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	11	241	7e-29
Pib [Oryza sativa].	50	259	7e-13
Pi-ta [Oryza sativa]	58	254	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	58	78
putative coiled-coil	121	141

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4944.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)