Report for 5104.m00182

 > 5104.m00182, length: 254, copies: 1 

MSWALGTDCCSWEGINCRGENTVRDISLPSKGLAGSISPSLSNLTKLLHLNLSHNSLSGGLPMDSLLFSSIAVLD

VSFNHLDGPLQELQSSNPSLSLPLQVMNISSNFFHRTISISSTEMMKNLVALNASNNSFTGQIPASICISTPSFA

VLDLWSFGATNSDAEFPQNGKIPNSIGQLNKKNSIGQLRRLEELHLDNNNMEPISRGKSFRRMKQFMVLRTFRLT

GDIPSSIYVDEHADVTIRKETCHFGPQTP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	46	69	4
LRR [Pfam ls]	123	147	5.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	46	69	0.17
LRR [sensitive, ls]	46	69	4
LRR [sensitive, ls]	70	92	2
LRR [sensitive, ls]	70	92	47
LRR [sensitive, ls]	123	147	0.24
LRR [sensitive, ls]	123	147	5.5
LRR [sensitive, ls]	190	211	0.33
LRR [sensitive, ls]	190	211	7.8

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	10	233	1e-10
Xa21 [O. sativa]	10	141	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5104.m00182

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)