Report for 5132.m00190

 > 5132.m00190, length: 870, copies: 1 

MVGLGWLGTSWDPGSGCQFGLNHRRPWVKAGRGLALNPLSGLLPKELGNLTNLLSLGISLDNFTGELPEELGNLT

KLQQLYIDSSGFSGPFPPTFSKLKNLNTLRASDNEFTGKIPDYLGSLTNLIDLILRNCKVSGNLGPVDFSMFTAL

ILLDLSFNNITGEVPQSILNMGKLEFLDFSYNQLTGNFPSWATQNNLQLNLVANKFDAGSNNRSKTLLVFVDLQN

VFIFLFFKDCSSQHDFRNFKNNGYVFHILTDYSFAVDCGSNSSTRGSDNTIYEAEPTNLGDASYYVTSQTRWGVS

NVGKFSLASNGMNIISSSEHFQNAVNSRLFETARMSPSSLRYYGLGLENGNYTILLQFAEVAYPDSQTWQSLGRR

VFDIYIQGSLREKDFDIRKMAGGKSFIVVHRSYTATVSNNFLEIHLFWAGKGTCCIPTNGYYGPMISALSVSPNF

TPTVRNGVPKRRSKVHTIAGILIGASILGLAALFGIFMMVKKRRTMAQQKEELYNLIGRPDVFSNTELRLATDNF

SSQNILGEGGYGMLYKLYFIRVYLSDFVFKSNFSKLLFGRGKLSDGRVIAVKQLSQSSHQGKSQFVAEVTTISAM

QHRNLVKLHGFCIDSNTPLLVYEYLQNGSLDTALFGHSRLNLDWGTRFNIILGIASGLTYLHEESSVRIVHRDIK

ASNILLETDLTPKISDFGLAKLYDEKQTHVSTRIAGTLGYLAPEYAMRGRLTEKVDVFAFGVVVLEIVAGRSNTN

NSLEESKIYLFEWLWDLYEKEQVLGIVDPSLKDFNNNEAFRVIRVALLCTQGSPHQRPPMSKALAMLTGEVELSE

VVVKPSYITEWQLRDVNRSYATSSYSGSTNPEFSTQKEIEPLTQS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	100	123	0.4
LRR [Pfam ls]	149	172	2.3
LRR [Pfam ls]	173	197	1.1
Ser/Thr pkinase [Pfam ls]	525	819	7.1e-38
Ser/Thr pkinase [Pfam fs]	565	745	3.8e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	52	75	1.6
LRR [sensitive, ls]	52	75	44
LRR [sensitive, ls]	76	99	0.27
LRR [sensitive, ls]	76	99	7.4
LRR [sensitive, ls]	100	123	0.015
LRR [sensitive, ls]	100	123	0.4
LRR [sensitive, ls]	124	148	0.39
LRR [sensitive, ls]	124	148	11
LRR [sensitive, ls]	149	172	0.086
LRR [sensitive, ls]	149	172	2.3
LRR [sensitive, ls]	173	197	0.042
LRR [sensitive, ls]	173	197	1.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	33	186	6e-17
FLS2 [A.thaliana]	33	186	1e-13
Cf-9 [L. pimpinellifolium]	34	189	3e-12
CLV2 [A. thaliana]	34	248	3e-17
CLV2 [A. thaliana]	34	189	3e-14
FLS2 [A.thaliana]	34	239	1e-19
FLS2 [A.thaliana]	34	201	1e-19
FLS2 [A.thaliana]	34	190	3e-18
FLS2 [A.thaliana]	34	225	1e-17
FLS2 [A.thaliana]	34	190	4e-15
Xa21 [O. sativa]	34	226	2e-16
Xa21 [O. sativa]	34	194	3e-12
FLS2 [A.thaliana]	37	189	5e-20
FLS2 [A.thaliana]	37	215	2e-19
FLS2 [A.thaliana]	37	190	2e-19
FLS2 [A.thaliana]	37	197	2e-19
FLS2 [A.thaliana]	37	234	2e-17
FLS2 [A.thaliana]	37	204	2e-15
Xa21 [O. sativa]	37	210	3e-18
Xa21 [O. sativa]	37	210	3e-14
Cf-9 [L. pimpinellifolium]	39	228	1e-15
Cf-9 [L. pimpinellifolium]	39	225	1e-14
CLV2 [A. thaliana]	39	202	4e-11
FLS2 [A.thaliana]	39	190	3e-16
Xa21 [O. sativa]	39	195	7e-23
Xa21 [O. sativa]	41	228	3e-19
FLS2 [A.thaliana]	52	205	5e-14
CLV2 [A. thaliana]	53	206	9e-16
Xa21 [O. sativa]	53	205	4e-14
FLS2 [A.thaliana]	477	817	7e-37
Pto [L. esculentum]	513	828	2e-50
Rpg1 [Hordeum vulgare]	518	814	9e-28
Rpg1 [Hordeum vulgare]	522	818	5e-35

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	468	490	out -> in

Report for 5132.m00190

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)