Report for 5169.m00244

 > 5169.m00244, length: 303, copies: 2 

MTKSFAHTLGKGGYGTVYKGSLSDGSEIAVKMLEDTKDDAEDFINEVVSIGRTSHINVVTLLGLCLHRSKRALVY

EYMPNGSLDKYAVGVVDTVQGEKSLSWEKLYEILVGIAQGLDYLHRWCNHRVVHLDIKPQNILLDQDFRPKISDF

GLAKLCKPKESKISIGGARGTIGYMAPEVFWRHHGAVTTKSDVYSYGMLILQMVGARENTNASMQTVSKYFPEWL

YDNLNQFCGAATEGIDSRNTCISEVARKLVTIGFWCIQCTPEDRPSMSEVIDMFDRSMHELQLPPRMSCCGIDNP

SIV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	3	279	2.7e-41
Ser/Thr pkinase [Pfam fs]	8	204	2.8e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	2	276	1e-29
Rpg1 [Hordeum vulgare]	4	281	6e-30
Pto [L. esculentum]	9	276	2e-40
Rpg1 [Hordeum vulgare]	9	277	4e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5169.m00244

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)