Report for 5175.m00133

 > 5175.m00133, length: 409, copies: 1 

MWENLMSVLPRNNKKSRVITTTRMSNVASSRSPRSNGHIYEMESLNDADSKELFSKIIFDHKGKCPKALDEIADE

ILKKCGGIPLAIITLASLLAKKPKTRKEWKRVKSSIGNACELEGMRQTLSLSFYDLSYDLRNCFLSFSSFPEDYE

IDRERLVLRWIAEGFISGKEQQELMEEEGNNYFNELVNRSLIQPIDIQYNGSARACRVHDLMLELIVSLSKEENF

ITTLNGPECLPMPSKIRWLSLHSNENEVMQVVTNNRRHVRSVSFFPPVAQLPPFVEFQAMRVFDVKGCQFGEHKK

MKNMESLIQLKYLNLAYTNVTELPKEIGEVHFLETLDVRNCQIQSLPPSLCQLQKLVRLFVSLGVTLPDKIGKMQ

ALEELSHVAILCNSLNFVKALGELTKLRVFRVDC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	171	1.6e-06
NB-ARC [Pfam fs]	2	171	1.2e-37
LRR [Pfam ls]	309	331	3.7
LRR [Pfam ls]	332	354	0.02

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	309	331	0.14
LRR [sensitive, ls]	309	331	3.7
LRR [sensitive, ls]	332	354	0.00076
LRR [sensitive, ls]	332	354	0.02

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	1	356	5e-36
Mla1 [Hordeum vulgare].	1	407	8e-68
Pi-ta [Oryza sativa]	1	402	4e-47
I2 [L. esculentum]	2	385	3e-26
Pib [Oryza sativa].	2	356	9e-46
Xa1 [Oryza sativa]	2	408	3e-21
RPS2 [A. thaliana]	10	402	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 5175.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)