Report for 5287.m00142

> 5287.m00142, length: 394, copies: 1
MQLILLLSKPRTLQLFPLLLCLLLLPCLSQPLPSPSPSPSPSPSASPAPPPSLPLSPFNERLEAAYVAFQAWKHA
ITEDPKNLTEDWCGPFVCNYTGVYCAAAPDDPHVLTVAGVDLNHGDIAGCLPDHLGLLADVALLHLNSNRFRGTL
PPSMQHMRLLFELDVSNNLLAGAFPAFLTSLPGLKFLDLRFNAFDGELPAAVFGRRLGLDAIFANDNRFNVSLSS
ASLTNSTASVIVLANTRLAGCLPPSIGDMADTLVELILLNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASV
GDMESLEVLNVGHNMLAGEVPEAICELPRLRNLTIAGNYFCDEPVSCLHVPLRDDRMNCIPDWPHQRSPEECIAF
AHRPPPHCAADGCIVIPPP

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]2813040.054
LRR [Pfam ls]3053280.68

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]1351580.42
LRR [sensitive, ls]13515813
LRR [sensitive, ls]1591820.6
LRR [sensitive, ls]15918219
LRR [sensitive, ls]1832070.66
LRR [sensitive, ls]18320721
LRR [sensitive, ls]2572800.79
LRR [sensitive, ls]25728025
LRR [sensitive, ls]2813040.0017
LRR [sensitive, ls]2813040.054
LRR [sensitive, ls]3053280.022
LRR [sensitive, ls]3053280.68

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
Xa21 [O. sativa]443432e-21
CLV2 [A. thaliana]523431e-19
FLS2 [A.thaliana]603392e-24
Xa21 [O. sativa]933331e-19
Xa21 [O. sativa]1053218e-18
Cf-9 [L. pimpinellifolium]1083622e-12
Xa21 [O. sativa]1083388e-19
FLS2 [A.thaliana]1103405e-21
FLS2 [A.thaliana]1103384e-18
Cf-9 [L. pimpinellifolium]1153383e-17
Cf-9 [L. pimpinellifolium]1153399e-15
CLV2 [A. thaliana]1153407e-23
CLV2 [A. thaliana]1153432e-22
CLV2 [A. thaliana]1153404e-17
FLS2 [A.thaliana]1153438e-22
FLS2 [A.thaliana]1153232e-20
FLS2 [A.thaliana]1153433e-18
Xa21 [O. sativa]1153401e-20
Xa21 [O. sativa]1152992e-11
CLV2 [A. thaliana]1173517e-13
Xa21 [O. sativa]1173226e-13
FLS2 [A.thaliana]1183584e-18
Xa21 [O. sativa]2383389e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation